factR2

An R package to functionally annotate transcripts from custom transcriptomes and probe for potential regulatory functions of alternative-spliced exons.

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factR

factR is a robust and easy-to-use R package with tools to process custom-assembled transcriptomes (GTF).

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Ducasse

Ducasse is an R package that detects alternatively- spliced events from a transcriptome annotation file (GTF) and classifies them into the major splicing categories.

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